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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904170.1_cds_XP_016454325.1_48364
CDS Infomation

[gene=LOC107778558] [db_xref=GeneID:107778558] [protein=uncharacterized protein LOC107778558 isoform X3] [protein_id=XP_016454325.1] [location=complement(join(27266..27277,27780..28049,29585..29723,29885..29959,30112..30263,31756..31899,31976..32117,32232..32372,32493..32602,33589..33736,34606..34678,35177..35363,35924..36196))] [gbkey=CDS]
Sequence

ATGAGCTCTCTTTCAAATCAGGTAATGCGTAGCTGCATCAAGGACCATGAGGCCTCAGCC
ATGGAATTGGGGCGCCGGCAGAAATCAGAAGTAGAAGAAGAAGAGGAAGAGGAAGATCCA
TTTCTTCAATTCATTGAGTACGCTAAGTCCGTACTATCTCCCGATGAAGCAAAGGGCCCT
AGTTGGAGCTGGATTGCTTATAAGATTCTCAAGACTTGCATTGCTTATTCATCTGGAGTT
ACCTCCGCTATTCTCCTCTCCGATCTCTTTCAGGCTTGGAATGAATTGAATAGGAGTGGA
GTTCCAAAGAAACAGTCAGAATGTATTAGTCACATGAAGAAGAAGCATAAGAGGGCAAAG
CTTCCTAACACTGTCACCATTGACTCTATATATGAGAAAAAGTTCTTATCTTTGAACAGT
GTAATTGAAGCTGTCATTATAGACACTTTCGTTCTTCCAGGAACAAACATTTATATGCTT
CATCTGGGTGATTTTTGGAGTTCTAATACAATAGATCTGTATCTTCACCGTAGATTCTAC
AGCTTAGCTGATCCAAAGAATGGTATTTTGAAGAAAGGTCGTGAAGTTTTCCTCACAGGA
TGCCGCCTCCGAACTGCCACTGGATGTTCAGGTCATGCACGGCTTTTGCCAACTGAATAT
CTTGTGATACTGTTAGATGAGGACCAAGATGATGATGCAATGTTGCTTTTAGCACGATTT
TGTGCAGATTCCTTCTCTTCCATTTCTCTTGGTACAGTCAATCAAGGGGTCTCCTATTCA
TTACGTGCAAGGATTGAATCTATTACTTCTCCGGAGGTTCAAGGGAAGTATGGTAGTTTG
CAGAGGAAGCAAATTAATCTTGTTGATTTTGATGGTGTCACTTCAAAATTTCTTTTGTGG
GGTGAGCAGGTTCTGCTTGCAAACGTATTTAGCGTGGGAAGTACGCTTGCCCTGGATAGA
CCATTTATTTTGAGTTCCACTGAGAGTGCTCTTGAATTATCTGAAGAATTTTGCCTTGAA
TATGGCACTGCAACACAGTTATATCTGGTGCCTTTTATTCGGCATGAGGAGCAAGTATCC
GTAACATTGACGCAGAACCATCATAAAGGGTCAAAACTATCAAGAGCTATGGATCCAAGT
CAGGGACTTGTAGTCTCCCAGGTTTCCCTGCCTTGTAATTCTCAAGGTTCTATTGACTTC
AGTAATTATCCTTTCCGATCATTTGTTATTGATCTTCGGGAGAAGATGACCGGAGTAAGC
CTCTATGGTATTGTTGCTGACATCAGAAGTACTCAAGAACCAGTATTTTCTGTTAAGATT
CAAGATGTAACTGGTGCAGTTTGGGTGAGACTACATTTTGATCGATCCTGGTCATTAGGG
AGACTAGGACTGGGGCATAGTATTTACATATCTGGTTTGGCGTGCTCTATGGGGACAAGA
AAAAGCCTAGAACTGCAGTGGTTCGAGAATGATGGTGGAGCTTCATTTATTAATATTAGT
TGCTTACCAGCGCTACTTAACTCATCTTTTCTTCACAAGTTATCCTGCCTTTCTGATTTA
TCAGTCGAGCCTACTGGTATCCGTGTATGTCGAGTCTGGCTGGATCAAATTGAACATTGT
CACGTGACTACGAGACTATCACATACGTCTTGTGGTTATTTTCGTGATGATAGTTCCATT
GAGGATCTCAAGTGCAGCTTCTGTCAATGTAAATGCAATGCAGAACTGGCATGGAGTTTC
CATTTAAAAATAACTCTTGCAGATGAGAGTGGAAAAATCTTTGCCTGGTGTACTGGTCAA
ACTGCCGTGGAGTTGCTGCAAATAACTCCTGATGAATTCTGCGAACTACCAGAGGAAAAA
GGTTGA

Peptide Sequence

PEP ID

XP_016454325.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107778558 isoform X3 [Nicotiana tabacum]
Sequence

MSSLSNQVMRSCIKDHEASAMELGRRQKSEVEEEEEEEDPFLQFIEYAKSVLSPDEAKGP
SWSWIAYKILKTCIAYSSGVTSAILLSDLFQAWNELNRSGVPKKQSECISHMKKKHKRAK
LPNTVTIDSIYEKKFLSLNSVIEAVIIDTFVLPGTNIYMLHLGDFWSSNTIDLYLHRRFY
SLADPKNGILKKGREVFLTGCRLRTATGCSGHARLLPTEYLVILLDEDQDDDAMLLLARF
CADSFSSISLGTVNQGVSYSLRARIESITSPEVQGKYGSLQRKQINLVDFDGVTSKFLLW
GEQVLLANVFSVGSTLALDRPFILSSTESALELSEEFCLEYGTATQLYLVPFIRHEEQVS
VTLTQNHHKGSKLSRAMDPSQGLVVSQVSLPCNSQGSIDFSNYPFRSFVIDLREKMTGVS
LYGIVADIRSTQEPVFSVKIQDVTGAVWVRLHFDRSWSLGRLGLGHSIYISGLACSMGTR
KSLELQWFENDGGASFINISCLPALLNSSFLHKLSCLSDLSVEPTGIRVCRVWLDQIEHC
HVTTRLSHTSCGYFRDDSSIEDLKCSFCQCKCNAELAWSFHLKITLADESGKIFAWCTGQ
TAVELLQITPDEFCELPEEKG

Transcript Sequence

Gene sequence data has not been registered.